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Introduction to hamlet11 months ago
User guide to the ePCR R-package3 years ago
Description of the ePCR package | Loading the example clinical cohorts into the R session | PSP-objects | PEP-objects | Predictions based on PEP/PSP-objects | Using the provided DREAM and TYKS ePCR-models | Session info
Overview to curatedPCaData3 years ago
Package overview | R-package | Downloading data from ExperimentHub or loading them from local cache | All available datasets | Dataset criteria | Studies | Citations | Curated clinical variables | Clinical end-points | Querying datasets | Accessing primary data | ExperimentHub data listing | Omics sample count and overlap | Derived variables | Immune deconvolution | Risk scores and other metrics | Single study example for Taylor et al. | Downloading the MAE-object | Kaplan-Meier curves | Cox regression | Session info | References
Example use of the OSCAR package3 years ago
OSCAR modelling | Cox regression (simulated TYKS real-world PCa data) | Goodness of fit vs. model coefficient cost | Cross-validation and bootstrapping | Further useful commands | Other model families | Gaussian regression (swiss-data) | References | Session info